CDS

Accession Number TCMCG064C05356
gbkey CDS
Protein Id XP_011071203.1
Location complement(join(18227999..18228155,18228256..18228431,18228509..18228666,18228900..18228969,18229168..18229315,18229743..18229866,18230580..18230672,18230781..18230995,18231207..18231293,18231719..18231810,18233114..18233230,18233321..18233373,18233558..18233775,18234107..18234211,18234313..18234405,18234931..18235130))
Gene LOC105156688
GeneID 105156688
Organism Sesamum indicum

Protein

Length 701aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268358
db_source XM_011072901.2
Definition probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 [Sesamum indicum]

EGGNOG-MAPPER Annotation

COG_category A
Description ATP-dependent RNA helicase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12818        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGCAATTACCTATACTCCAATTCGAAGAGAAAATTGTAGAAACAGTAGAGAAAAATCCTGTCGTGGTAATAATTGGAGAAACTGGTTCTGGTAAAAGCACTCAACTTTCTCAAATTCTTCAACGGAGAGGTTACACGAAATCTGGTTGCATTGCTGTTACTCAGCCGCGTCGGGTCGCTGCTGTTTCTGTATCTAGGCGTGTTGCGCAGGAACTCAATGTTAAGCTTGGGGAGGAAGTAGGTTATGCCATACGCTTTGAAGATAGAACTTCAGAGAAGACACTGATTAAATACCTAACTGATGGAGTTCTCCTTCGTGAAAGTCTTTCCAATCCGGATCTGAGTCAATATTCAGTAATTATATTAGATGAAGCTCATGAGAGGAGCTTAAACACGGATATATTGCTTGGATTGATGAAGCGGTTGATTAAGTTACGTGCATCCAATTTGAAGGTTTTGATCACTTCAGCTACACTTGATGGTGAGAAAGTATCCAGATTCTTCTCTAATTGCCCCATCCTCAATGTCCCAGGAAAGTTGTTCCCCGTTGAGATACAGCATAGCTCAGAGAGACCCAAAAGTTATCTTGAAGCTTCTCTAAAAACAGCTATTGATATACATGTTCGAGAACCAGAAGGCGATGTCTTAATTTTCATGACAGGACAGGATGATATCGAGAAGTTGGTGTCAAAATTGGAAGAGAGAATCAAACACCTGGAAGAAGGGTCTTGTATGGATGCTATAATTCTTCCACTTCATGGATCTTTGCCTCCTGAATTGCAGGTCCGTGTATTCAGTCAACCACCTCCCAATTGTCGTAGATTTATAATTGCTACAAACATAGCTGAGACCTCTTTGACTGTTGATGGTGTGGTCTATGTAATTGATACCGGTTTTGTGAAGCAGCGACAGTACAACCCATCAACTGGCATGTATTCTCTTGATGTTGTCCAAATTAGCAAAGTGCAGGCTAATCAGCGTGCGGGAAGAGCTGGAAGGACACGTCCTGGAAAGTGCTACCGTCTGTACCCTTCCGTGGTTTACAAGGATGACTTTTTGGATGCTACAGTCCCTGAAATACAGAGATCTTCCCTTGCGGGAAGTGTGCTCTATTTAAAATCATTAGACCTCCCGGACATTGATATTCTCAAATTTGACTTCCTTGATCCACCTTCCTCTGAGGCTTTGGAAGATGCCTTAAAGCAGCTATATCTCATTGATGCCATAGATGAAGATGGTTCAATCACAAGTCTTGGACGAACTATGGCTGAACTTCCACTAGAACCTTCACTGTCGAGGACTTTGTTAGAGGCAAATGAGTGTGGCTGTTTATCTCATGCTTTAACAGTTGCCGCAATGCTATCAGCAGAAACTACATTGCTTTTAGGTCAAAGTAAGAGCACTGATAAGAAGCGGAAGCATACTCCTTCACACCTTCCTGATGGTTCTGGGTGGGGTGACCACATCCAGTTGTTGCAAATTTATGAGCTTTGGCATCAAACTGACTACAGCACAGACTGGTGCAAGGAGAACAACTTGCAGGTGAGAGGGATGATGTTTGTCAAGGATGTCAGGAAGCAGTTAACCCAGATAATGCAGAAGATTGCTAAAGGATCCATGGATGTTAAAACAAGTCAAAAACGGAAAGAAGGCCAAGATTACAGACCTTTGAGAAAAGCTCTGTGTTCAGGATTTGCAAATCAACTTGCGGAGCGAATGATTCGTCATAATGGCTATCGCACCCTCGGTTTCAAGTCACAGTTAGTTCAGGTGCATCCGTCATCAGTGCTGAAACCAGATGAAGATGGTATGCTCCCAAATTACGTTGTCTATCATGAACTTATTGCTACATCACGGCCATATATGCGTAATGTATGTGCCGTTGAGATGCAGTGGGTCAGGCCAGTCTTAGCTAAACTCGATAAAATAAATGTCAGGAAACTCAGTGGCGGAGGCAGCCAGTCCCATGAAGAAATTCAAACGGAAAACTTAAACCTGCCGAAGGATGATGCTGGTGTTCCTCAGCCCCTTGATGACCGAGAGAGTAGAATTCTTGCAGCTCGGGAACGTTTTCTTGCTCGTAGTCGTAAAGCCAACAAATAA
Protein:  
MAQLPILQFEEKIVETVEKNPVVVIIGETGSGKSTQLSQILQRRGYTKSGCIAVTQPRRVAAVSVSRRVAQELNVKLGEEVGYAIRFEDRTSEKTLIKYLTDGVLLRESLSNPDLSQYSVIILDEAHERSLNTDILLGLMKRLIKLRASNLKVLITSATLDGEKVSRFFSNCPILNVPGKLFPVEIQHSSERPKSYLEASLKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEERIKHLEEGSCMDAIILPLHGSLPPELQVRVFSQPPPNCRRFIIATNIAETSLTVDGVVYVIDTGFVKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSVVYKDDFLDATVPEIQRSSLAGSVLYLKSLDLPDIDILKFDFLDPPSSEALEDALKQLYLIDAIDEDGSITSLGRTMAELPLEPSLSRTLLEANECGCLSHALTVAAMLSAETTLLLGQSKSTDKKRKHTPSHLPDGSGWGDHIQLLQIYELWHQTDYSTDWCKENNLQVRGMMFVKDVRKQLTQIMQKIAKGSMDVKTSQKRKEGQDYRPLRKALCSGFANQLAERMIRHNGYRTLGFKSQLVQVHPSSVLKPDEDGMLPNYVVYHELIATSRPYMRNVCAVEMQWVRPVLAKLDKINVRKLSGGGSQSHEEIQTENLNLPKDDAGVPQPLDDRESRILAARERFLARSRKANK